tomfrankkirk.github.io

Tom Kirk

Bellhouse Scholar in biomedical engineering at the Institute of Biomedical Engineering / Wellcome Centre for Integrative Neuroimaging, Oxford University. Currently researching new analysis techniques for arterial spin labelling (ASL) perfusion imaging MRI data.

Personal CV

Linked in

Software

Toblerone: surface-based analysis tools for neuroimaging

Repo Docs

Regtricks: tools for combining and applying image transformations

Repo Docs

HCP-ASL: ASL processing pipeline for the Human Connectome Project

Repo

Oxford_asl: ASL processing pipeline using FSL

Repo

Publications

T. F. Kirk, T. S. Coalson, M. S. Craig and M. A. Chappell, “Toblerone: Surface-Based Partial Volume Estimation,” in IEEE Transactions on Medical Imaging, vol. 39, no. 5, pp. 1501-1510, May 2020, doi: 10.1109/TMI.2019.2951080.